|
9:30 - 10:45 |
11:15 - 12:30 |
13:00 - 14:00 |
14:00 - 17:30 |
18:00 - 19:00 |
19:15 - 21:00 |
| 1 Tues |
Arrival |
Overview of the course, Introductions
Lecture 1 - EM Preparation Methods
Carolyn Moores |
Dinner |
Guest Lecture 1
John Rubinstein |
2
Wed |
Lecture 2 Basic concepts of Fourier analysis, Concepts of convolution, and correlation
Paula da Fonseca |
Lecture 3 Principles of TEM image formation
Peter Rosenthal |
Lunch |
Practical 1
General principles of image processing: EMAN2.1, defocus determination, particle picking
Instructors: H.Saibil, N. Lukoyanova
Data Files Zip File .tar.gz
|
Dinner |
Poster Session,
first group |
3
Thurs |
Lecture 4 Image acquisition, noise, particle detection, alignment
Helen Saibil |
Lecture 5 Point group symmetries
Elena Orlova |
Lunch |
Practical 2 Relion
Instructors: S. Scheres & G. Zanetti
Relion Tutorial (MRC,LMB, Cambs) .tar.gz |
Dinner |
Guest lecture 2
David Bhella |
4
Fri |
Lecture 6 Contrast transfer & CTF correction
Helen Saibil |
Lecture 7 MSA & classification of single particles
Dan Clare |
Lunch |
Practical 3 Relion
Instructors: S. Scheres & G. Zanetti
Relion Tutorial (MRC,LMB, Cambs) .tar.gz |
Dinner |
Guest lecture 3
Sriram Subramaniam |
5
Sat |
Lecture 8 Methods for determination of angular orientations.
Elena Orlova |
Lecture 9 Reconstruction principles and Tomography strategy
Kay Grünewald |
Lunch |
Practical 4: ( IMOD (tomography)
Part1 Part2
Instructors: Dan Clare
Data Files Zip File .tar.gz
|
Dinner |
Selected student talks
(3) |
6
Sun |
Free Day |
Group excursion London Eye at 5:30 pm |
Course dinner at 7:30 pm |
7
Mon |
Lecture 10 Methods of 3D reconstructions
Sarah Butcher |
Lecture 11 Validation of 3D EM reconstructions, assessment of resolution
Peter Rosenthal |
Lunch |
Ben Bammes - Direct Detectors
General Info
Practical 5 MSA+Angrec (IMAGIC)
Instructors: E. Orlova & M.Carroni
Data Files Zip File .tar.gz
|
Dinner |
Poster Session, second group |
8
Tues |
Lecture 12 Image detectors
Paul Mooney (Gatan) |
Lecture 13 High resolution structures
Wah Chiu |
Lunch |
Leica - R. Ranner - Ion beam surfacing
Practical 6 3D reconstruction (IMAGIC)
Instructors: E.Orlova, & M. Carroni
Data Files Zip File .tar.gz
|
Dinner |
Guest lecture 4
Gabriel Waksman |
9
Weds |
Lecture 14 Interpretation of maps, docking of atomic structures
Maya Topf |
Guest lecture 15
Venki Ramakrishnan |
Lunch |
Jeol - A. Yarwood
Practical 7 Fitting (Chimera)
Instructors: M. Topf
Data Files Zip File .tar.gz
|
Dinner |
Guest lecture 6
Bridget Carragher |
10
Thurs |
Lecture 16 Cs-correctors
Felix de Haas (FEI) |
Guest lecture 17
Richard Henderson |
Lunch |
Practical 8
Handout 1
Handout 2
Coot. Instructors: Paul Emsley
Data Files Zip File .tar.gz
|
Dinner |
Selected student talks
(3) |
11
Fri |
Lecture 18 Data deposition
Ardan Patwardhan |
Questions, Suggestions, Summary
Departure after lunch |
Lunch |
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